SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Rhoads TW et al., 2015 9 NeuCode Labeling in Nematodes: Proteomic and Phosphoproteomic Impact of Ascaroside Treatment in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00048573.ce.ms.csv (details)
26392051
Riedel CG et al., 2013 8 DAF-16 employs the chromatin remodeller SWI/SNF to promote stress resistance and longevity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042296.ce.rs.csv (details)
23604319
Rizki G et al., 2011 28 The evolutionarily conserved longevity determinants HCF-1 and SIR-2.1/SIRT1 collaborate to regulate DAF-16/FOXO.
GEO Record: GSE30725 Platform: GPL13922
Download gene-centric, log2 transformed data: WBPaper00040184.ce.mr.csv (details)
21909281
Robert VJ et al., 2014 12 The SET-2/SET1 histone H3K4 methyltransferase maintains pluripotency in the Caenorhabditis elegans germline.
GEO Record: GSE61094 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00045861.ce.mr.csv (details)
25310986
Rockman MV et al., 2010 208 Selection at linked sites shapes heritable phenotypic variation in C. elegans.
GEO Record: GSE23857 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00037680.ce.mr.csv (details)
20947766
Rodriguez JD et al., 2025 1 scRNAseq of spr-5; met-2 mutant embryos
GEO Record: GSE272897, Platform: GPL19757
Lab Atlas: N.A.
Other resources: N.A. (details)
40991443
Rogers AN et al., 2011 24 Life span extension via eIF4G inhibition is mediated by posttranscriptional remodeling of stress response gene expression in C. elegans.
GEO Record: GSE28665 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00039835.ce.mr.csv (details)
21723504
Roh JY et al., 2009 2 Ecotoxicity of silver nanoparticles on the soil nematode Caenorhabditis elegans using functional ecotoxicogenomics.
GEO Record: GSE14932 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00034661.ce.mr.csv (details)
19544910
Rohlfing AK et al., 2010 30 Genetic and physiological activation of osmosensitive gene expression mimics transcriptional signatures of pathogen infection in C. elegans.
GEO Record: GSE19310 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035873.ce.mr.csv (details)
20126308
Romagnolo B et al., 2002 29 Downstream targets of let-60 Ras in Caenorhabditis elegans.
GEO Record: GSE2974 Platform: GPL2653
Download gene-centric, log2 transformed data: WBPaper00005376.ce.mr.csv (details)
12074557
Romiguier J et al., 2014 10 Comparative population genomics in animals uncovers the determinants of genetic diversity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046067.cbn.rs.csv (details)
25141177
Roux AE et al., 2023 1 Individual cell types in C. elegans age differently and activate distinct cell-protective responses.
GEO Record: GSE208154, Platform: GPL22765
Lab Atlas: http://c.elegans.aging.atlas.research.calicolabs.com/
Other resources: N.A. (details)
37531250
Roy PJ et al., 2002 6 Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans.
GEO Record: GSE2971 Platform: GPL2653
Download gene-centric, log2 transformed data: WBPaper00005428.ce.mr.csv (details)
12214599
Rytinki MM et al., 2011 9 Overexpression of SUMO perturbs the growth and development of Caenorhabditis elegans.
GEO Record: GSE19972 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038060.ce.mr.csv (details)
21253676
Saha S et al., 2016 1 Polar Positioning of Phase-Separated Liquid Compartments in Cells Regulated by an mRNA Competition Mechanism.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00050091.ce.ms.csv (details)
27594427
Sahu SN et al., 2012 15 Genomic analysis of immune response against Vibrio cholerae hemolysin in Caenorhabditis elegans.
GEO Record: GSE34026 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041163.ce.mr.csv (details)
22675448
Sahu SN et al., 2013 9 Genomic analysis of stress response against arsenic in Caenorhabditis elegans.
GEO Record: GSE39012 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00043980.ce.mr.csv (details)
23894281
Sarkies P et al., 2013 20 Competition between virus-derived and endogenous small RNAs regulates gene expression in Caenorhabditis elegans.
GEO Record: GSE41056 GSE41058 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042574.ce.mr.csv (details)
23811144
Saul J et al., 2022 1 Comparison of wild-type and ctbp-1(lf) AIA neuron transcriptional profiles in L4 larval stage C. elegans
GEO Record: GSE179484, Platform: GPL19757
Lab Atlas: N.A.
Other resources: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA743925 (details)
35119366
Saul N et al., 2014 6 Neurotoxic action of microcystin-LR is reflected in the transcriptional stress response of Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045807_2.ce.mr.csv (details)
25257166
Saul N et al., 2014 6 Neurotoxic action of microcystin-LR is reflected in the transcriptional stress response of Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045807.ce.mr.csv (details)
25257166
Saul N et al., 2015 15 Adsorbable organic bromine compounds (AOBr) in aquatic samples: a nematode-based toxicogenomic assessment of the exposure hazard.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046853.ce.mr.csv (details)
25994267
Schiavi A et al., 2023 30 Mitochondria hormesis delays aging and associated diseases in Caenorhabditis elegans impacting on key ferroptosis players.
GEO Record: GSE225776 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00065197.ce.mr.csv (details)
37020951
Schmeisser K et al., 2024 12 Mobilization of cholesterol induces the transition from quiescence to growth in Caenorhabditis elegans through steroid hormone and mTOR signaling.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066417.ce.ms.csv (details)
38267699
Schmeisser K et al., 2013 9 Role of sirtuins in lifespan regulation is linked to methylation of nicotinamide.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044260.ce.rs.csv (details)
24077178
Schmeisser S et al., 2013 4 Mitochondrial hormesis links low-dose arsenite exposure to lifespan extension.
GEO Record: GSE46257 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00042179.ce.rs.csv (details)
23534459
Schmeisser S et al., 2013 22 Neuronal ROS signaling rather than AMPK/sirtuin-mediated energy sensing links dietary restriction to lifespan extension.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044426.ce.rs.csv (details)
24199155
Schott D et al., 2014 24 Natural RNA interference directs a heritable response to the environment.
GEO Record: GSE30666 Platform: GPL13914
Download gene-centric, log2 transformed data: WBPaper00046212.ce.mr.csv (details)
25552271
Schwarz EM et al., 2012 20 Functional transcriptomics of a migrating cell in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00041549.ce.rs.csv (details)
22991463
Schwarz EM et al., 2015 2 The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046511.ce.rs.csv (details)
25730766